Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGC3Q9UN70 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 AC233702.5-201ENST00000584107 538 ntBASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGC3Q9UN70 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 RCC2P6-201ENST00000526625 1557 ntBASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHGC3Q9UN70 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 AP000974.1-201ENST00000623909 2387 ntBASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 AC091390.4-202ENST00000476426 537 ntBASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 CD177P1-201ENST00000606252 935 ntBASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 AL049812.1-201ENST00000432563 2267 ntBASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGC3Q9UN70 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHGC3Q9UN70 AC004951.3-201ENST00000418645 1148 ntBASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms