Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
EBF1Q9UH73 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
EBF1Q9UH73 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EBF1Q9UH73 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
EBF1Q9UH73 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 AC092647.4-201ENST00000457211 535 ntBASIC19.58■□□□□ 0.72
EBF1Q9UH73 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.58■□□□□ 0.72
EBF1Q9UH73 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EBF1Q9UH73 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.57■□□□□ 0.72
EBF1Q9UH73 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
EBF1Q9UH73 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EBF1Q9UH73 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 AC009947.2-201ENST00000444014 672 ntBASIC19.56■□□□□ 0.72
EBF1Q9UH73 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
EBF1Q9UH73 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 AL353719.1-201ENST00000566847 864 ntBASIC19.56■□□□□ 0.72
EBF1Q9UH73 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 AL121956.5-201ENST00000625261 221 ntBASIC19.56■□□□□ 0.72
EBF1Q9UH73 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EBF1Q9UH73 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
EBF1Q9UH73 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 HOMER2P1-201ENST00000455653 964 ntBASIC19.55■□□□□ 0.72
EBF1Q9UH73 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.55■□□□□ 0.72
EBF1Q9UH73 AC011558.1-201ENST00000623459 338 ntBASIC19.55■□□□□ 0.72
EBF1Q9UH73 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EBF1Q9UH73 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms