Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 AC104187.1-201ENST00000607510 612 ntBASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.92■□□□□ 0.3
COMMD3Q9UBI1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COMMD3Q9UBI1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 AL354811.1-201ENST00000610286 706 ntBASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.9■□□□□ 0.3
COMMD3Q9UBI1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.89■□□□□ 0.3
COMMD3Q9UBI1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 AC139713.2-201ENST00000641328 2723 ntBASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COMMD3Q9UBI1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms