Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TREM2Q9NZC2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.59■□□□□ 0.25
TREM2Q9NZC2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 AC113410.3-201ENST00000623366 203 ntBASIC16.59■□□□□ 0.25
TREM2Q9NZC2 AC073912.3-201ENST00000624414 853 ntBASIC16.59■□□□□ 0.25
TREM2Q9NZC2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TREM2Q9NZC2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TREM2Q9NZC2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.58■□□□□ 0.25
TREM2Q9NZC2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TREM2Q9NZC2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TREM2Q9NZC2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TREM2Q9NZC2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 REXO1L12P-201ENST00000622156 912 ntBASIC16.58■□□□□ 0.24
TREM2Q9NZC2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 BX323043.1-201ENST00000641006 1765 ntBASIC16.58■□□□□ 0.24
TREM2Q9NZC2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 AC116562.4-201ENST00000641316 2276 ntBASIC16.58■□□□□ 0.24
TREM2Q9NZC2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.58■□□□□ 0.24
TREM2Q9NZC2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 MIR4785-201ENST00000585005 73 ntBASIC16.57■□□□□ 0.24
TREM2Q9NZC2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TREM2Q9NZC2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TREM2Q9NZC2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms