Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Z99916.2-201ENST00000604037 246 ntBASIC21.42■■□□□ 1.02
BLOC1S4Q9NUP1 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.42■■□□□ 1.02
BLOC1S4Q9NUP1 AC131212.4-201ENST00000623606 975 ntBASIC21.42■■□□□ 1.02
BLOC1S4Q9NUP1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
BLOC1S4Q9NUP1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
BLOC1S4Q9NUP1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 AC233702.5-201ENST00000584107 538 ntBASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
BLOC1S4Q9NUP1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 FAM197Y1-201ENST00000421178 764 ntBASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 RCC2P6-201ENST00000526625 1557 ntBASIC21.4■■□□□ 1.02
BLOC1S4Q9NUP1 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 AL135905.2-201ENST00000584934 1404 ntBASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.39■■□□□ 1.02
BLOC1S4Q9NUP1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 MESTP1-201ENST00000404287 994 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AC012618.2-201ENST00000428058 849 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 TSPY21P-201ENST00000433481 731 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AC011506.1-201ENST00000474329 610 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AC091390.4-202ENST00000476426 537 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 AC113410.3-201ENST00000623366 203 ntBASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S4Q9NUP1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 FEM1AP3-201ENST00000403722 1741 ntBASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 CD177P1-201ENST00000606252 935 ntBASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S4Q9NUP1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 AC026271.3-201ENST00000571884 352 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms