Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRDM9Q9NQV7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 AC141586.3-201ENST00000562166 1838 ntBASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 AP003071.4-201ENST00000562276 1284 ntBASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PRDM9Q9NQV7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 TSPY21P-201ENST00000433481 731 ntBASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRDM9Q9NQV7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 AC116562.2-201ENST00000507042 360 ntBASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRDM9Q9NQV7 BX323043.1-201ENST00000641006 1765 ntBASIC18.14■□□□□ 0.5
PRDM9Q9NQV7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRDM9Q9NQV7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
PRDM9Q9NQV7 FSCN1P1-201ENST00000568912 1481 ntBASIC18.14■□□□□ 0.5
PRDM9Q9NQV7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.14■□□□□ 0.5
PRDM9Q9NQV7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 REXO1L12P-201ENST00000622156 912 ntBASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.14■□□□□ 0.49
PRDM9Q9NQV7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRDM9Q9NQV7 SDHAP1-207ENST00000440850 2000 ntBASIC18.13■□□□□ 0.49
PRDM9Q9NQV7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRDM9Q9NQV7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRDM9Q9NQV7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRDM9Q9NQV7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms