Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 AL139384.1-201ENST00000612143 3047 ntBASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 AC105265.2-201ENST00000467189 838 ntBASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 RBM17P2-201ENST00000616397 1405 ntBASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLIRPQ9GZT3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 AC097381.1-201ENST00000429019 1296 ntBASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.91■□□□□ 0.3
SLIRPQ9GZT3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 AC009299.2-201ENST00000482477 511 ntBASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.9■□□□□ 0.3
SLIRPQ9GZT3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms