Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 Z98044.1-201ENST00000632503 1764 ntBASIC17.63■□□□□ 0.41
COPS4Q9BT78 NOC2LP1-202ENST00000452600 2235 ntBASIC17.63■□□□□ 0.41
COPS4Q9BT78 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COPS4Q9BT78 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.63■□□□□ 0.41
COPS4Q9BT78 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 NOC2LP2-201ENST00000407594 1944 ntBASIC17.62■□□□□ 0.41
COPS4Q9BT78 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 PHGDH-210ENST00000641115 1638 ntBASIC17.62■□□□□ 0.41
COPS4Q9BT78 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 CYP2T1P-201ENST00000432607 1285 ntBASIC17.62■□□□□ 0.41
COPS4Q9BT78 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 AC100791.3-201ENST00000617619 330 ntBASIC17.62■□□□□ 0.41
COPS4Q9BT78 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.62■□□□□ 0.41
COPS4Q9BT78 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.62■□□□□ 0.41
COPS4Q9BT78 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COPS4Q9BT78 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 AC007322.1-201ENST00000426983 750 ntBASIC17.61■□□□□ 0.41
COPS4Q9BT78 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 AC231657.2-201ENST00000624556 255 ntBASIC17.61■□□□□ 0.41
COPS4Q9BT78 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.61■□□□□ 0.41
COPS4Q9BT78 AC093525.10-201ENST00000625130 1569 ntBASIC17.61■□□□□ 0.41
COPS4Q9BT78 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.61■□□□□ 0.41
COPS4Q9BT78 AC020916.1-201ENST00000587762 1774 ntBASIC17.61■□□□□ 0.41
COPS4Q9BT78 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COPS4Q9BT78 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COPS4Q9BT78 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.6■□□□□ 0.41
COPS4Q9BT78 AP000997.3-201ENST00000623333 2250 ntBASIC17.6■□□□□ 0.41
COPS4Q9BT78 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COPS4Q9BT78 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COPS4Q9BT78 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COPS4Q9BT78 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COPS4Q9BT78 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms