Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
SDHCQ99643 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SDHCQ99643 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
SDHCQ99643 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SDHCQ99643 PGM5P4-201ENST00000421970 445 ntBASIC16.59■□□□□ 0.25
SDHCQ99643 AC010141.2-201ENST00000452426 721 ntBASIC16.59■□□□□ 0.25
SDHCQ99643 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SDHCQ99643 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SDHCQ99643 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.59■□□□□ 0.25
SDHCQ99643 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.59■□□□□ 0.25
SDHCQ99643 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
SDHCQ99643 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SDHCQ99643 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SDHCQ99643 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SDHCQ99643 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SDHCQ99643 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SDHCQ99643 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.58■□□□□ 0.25
SDHCQ99643 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDHCQ99643 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
SDHCQ99643 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SDHCQ99643 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.58■□□□□ 0.25
SDHCQ99643 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDHCQ99643 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SDHCQ99643 AD000864.1-201ENST00000624076 2295 ntBASIC16.58■□□□□ 0.25
SDHCQ99643 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SDHCQ99643 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.58■□□□□ 0.24
SDHCQ99643 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.58■□□□□ 0.24
SDHCQ99643 AL358852.1-201ENST00000623174 1268 ntBASIC16.58■□□□□ 0.24
SDHCQ99643 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 KRT87P-202ENST00000534226 1464 ntBASIC16.58■□□□□ 0.24
SDHCQ99643 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.58■□□□□ 0.24
SDHCQ99643 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
SDHCQ99643 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SDHCQ99643 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SDHCQ99643 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.58■□□□□ 0.24
SDHCQ99643 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.58■□□□□ 0.24
SDHCQ99643 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SDHCQ99643 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 RBM17P2-201ENST00000616397 1405 ntBASIC16.57■□□□□ 0.24
SDHCQ99643 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.57■□□□□ 0.24
SDHCQ99643 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.57■□□□□ 0.24
SDHCQ99643 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.57■□□□□ 0.24
SDHCQ99643 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.57■□□□□ 0.24
SDHCQ99643 AC083906.6-201ENST00000641366 219 ntBASIC16.57■□□□□ 0.24
SDHCQ99643 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SDHCQ99643 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.57■□□□□ 0.24
SDHCQ99643 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SDHCQ99643 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.57■□□□□ 0.24
SDHCQ99643 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.57■□□□□ 0.24
SDHCQ99643 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.56■□□□□ 0.24
SDHCQ99643 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SDHCQ99643 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms