Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.43■□□□□ 0.86
ZNF558Q96NG5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
ZNF558Q96NG5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 SPDYE15P-201ENST00000424157 909 ntBASIC20.42■□□□□ 0.86
ZNF558Q96NG5 DUSP5P1-201ENST00000441325 1139 ntBASIC20.42■□□□□ 0.86
ZNF558Q96NG5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.42■□□□□ 0.86
ZNF558Q96NG5 CR769767.2-201ENST00000622735 460 ntBASIC20.42■□□□□ 0.86
ZNF558Q96NG5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF558Q96NG5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.41■□□□□ 0.86
ZNF558Q96NG5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 ZNF815P-204ENST00000434898 1737 ntBASIC20.41■□□□□ 0.86
ZNF558Q96NG5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF558Q96NG5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 TSPY23P-201ENST00000440136 739 ntBASIC20.4■□□□□ 0.86
ZNF558Q96NG5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms