Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 COX11P1-201ENST00000489116 835 ntBASIC18.3■□□□□ 0.52
TTC9Q92623 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.3■□□□□ 0.52
TTC9Q92623 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9Q92623 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9Q92623 AL158211.5-201ENST00000623583 2518 ntBASIC18.3■□□□□ 0.52
TTC9Q92623 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9Q92623 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.3■□□□□ 0.52
TTC9Q92623 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9Q92623 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9Q92623 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.3■□□□□ 0.52
TTC9Q92623 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TTC9Q92623 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.3■□□□□ 0.52
TTC9Q92623 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TTC9Q92623 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 LINC01006-201ENST00000333319 2292 ntBASIC18.29■□□□□ 0.52
TTC9Q92623 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TTC9Q92623 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC9Q92623 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TTC9Q92623 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9Q92623 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC9Q92623 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.29■□□□□ 0.52
TTC9Q92623 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9Q92623 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9Q92623 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TTC9Q92623 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.29■□□□□ 0.52
TTC9Q92623 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.29■□□□□ 0.52
TTC9Q92623 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TTC9Q92623 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TTC9Q92623 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TTC9Q92623 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC9Q92623 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC9Q92623 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC9Q92623 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.28■□□□□ 0.52
TTC9Q92623 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.28■□□□□ 0.52
TTC9Q92623 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.28■□□□□ 0.52
TTC9Q92623 AL691432.3-201ENST00000621860 400 ntBASIC18.28■□□□□ 0.52
TTC9Q92623 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.28■□□□□ 0.52
TTC9Q92623 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TTC9Q92623 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TTC9Q92623 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 AC004980.1-204ENST00000429707 299 ntBASIC18.27■□□□□ 0.52
TTC9Q92623 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.27■□□□□ 0.52
TTC9Q92623 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.27■□□□□ 0.52
TTC9Q92623 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.27■□□□□ 0.52
TTC9Q92623 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TTC9Q92623 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.27■□□□□ 0.52
TTC9Q92623 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TTC9Q92623 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.27■□□□□ 0.51
TTC9Q92623 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TTC9Q92623 BX323043.1-201ENST00000641006 1765 ntBASIC18.27■□□□□ 0.51
TTC9Q92623 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TTC9Q92623 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TTC9Q92623 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TTC9Q92623 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.27■□□□□ 0.51
TTC9Q92623 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
TTC9Q92623 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TTC9Q92623 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TTC9Q92623 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms