Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT9Q92600 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CNOT9Q92600 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT9Q92600 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT9Q92600 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CNOT9Q92600 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CNOT9Q92600 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT9Q92600 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CNOT9Q92600 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT9Q92600 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT9Q92600 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT9Q92600 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT9Q92600 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT9Q92600 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT9Q92600 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT9Q92600 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT9Q92600 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.71■□□□□ 0.43
CNOT9Q92600 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 AC073648.6-201ENST00000641589 218 ntBASIC17.71■□□□□ 0.43
CNOT9Q92600 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT9Q92600 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT9Q92600 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CNOT9Q92600 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.71■□□□□ 0.42
CNOT9Q92600 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CNOT9Q92600 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT9Q92600 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 AC239809.2-201ENST00000415381 517 ntBASIC17.7■□□□□ 0.42
CNOT9Q92600 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.7■□□□□ 0.42
CNOT9Q92600 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT9Q92600 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNOT9Q92600 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT9Q92600 AC004264.1-201ENST00000608354 794 ntBASIC17.7■□□□□ 0.42
CNOT9Q92600 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT9Q92600 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CNOT9Q92600 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 AL161938.1-201ENST00000569833 2180 ntBASIC17.7■□□□□ 0.42
CNOT9Q92600 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT9Q92600 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.69■□□□□ 0.42
CNOT9Q92600 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT9Q92600 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT9Q92600 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 TNXA-203ENST00000507684 2038 ntBASIC17.69■□□□□ 0.42
CNOT9Q92600 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 C1QL1P1-201ENST00000568105 661 ntBASIC17.69■□□□□ 0.42
CNOT9Q92600 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT9Q92600 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CNOT9Q92600 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT9Q92600 AL049812.1-201ENST00000432563 2267 ntBASIC17.69■□□□□ 0.42
CNOT9Q92600 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT9Q92600 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms