Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC3Q92529 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHC3Q92529 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SHC3Q92529 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SHC3Q92529 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.52■□□□□ 0.88
SHC3Q92529 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 KRT18P29-201ENST00000397031 1267 ntBASIC20.52■□□□□ 0.88
SHC3Q92529 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 TSPY23P-201ENST00000440136 739 ntBASIC20.52■□□□□ 0.88
SHC3Q92529 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC3Q92529 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC3Q92529 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SHC3Q92529 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SHC3Q92529 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.52■□□□□ 0.88
SHC3Q92529 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
SHC3Q92529 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SHC3Q92529 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC3Q92529 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 AC006333.2-201ENST00000607957 2099 ntBASIC20.51■□□□□ 0.87
SHC3Q92529 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 AC004980.1-204ENST00000429707 299 ntBASIC20.51■□□□□ 0.87
SHC3Q92529 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC3Q92529 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.51■□□□□ 0.87
SHC3Q92529 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.51■□□□□ 0.87
SHC3Q92529 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.51■□□□□ 0.87
SHC3Q92529 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.51■□□□□ 0.87
SHC3Q92529 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SHC3Q92529 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.51■□□□□ 0.87
SHC3Q92529 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SHC3Q92529 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SHC3Q92529 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.5■□□□□ 0.87
SHC3Q92529 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SHC3Q92529 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SHC3Q92529 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.5■□□□□ 0.87
SHC3Q92529 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.5■□□□□ 0.87
SHC3Q92529 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 RPS2P4-201ENST00000476944 856 ntBASIC20.5■□□□□ 0.87
SHC3Q92529 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.5■□□□□ 0.87
SHC3Q92529 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SHC3Q92529 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 RARRES2P10-201ENST00000564312 460 ntBASIC20.5■□□□□ 0.87
SHC3Q92529 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.5■□□□□ 0.87
SHC3Q92529 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.5■□□□□ 0.87
SHC3Q92529 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SHC3Q92529 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.5■□□□□ 0.87
SHC3Q92529 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.5■□□□□ 0.87
SHC3Q92529 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SHC3Q92529 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.5■□□□□ 0.87
SHC3Q92529 AC093503.3-201ENST00000624917 2352 ntBASIC20.5■□□□□ 0.87
SHC3Q92529 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SHC3Q92529 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SHC3Q92529 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 AC004408.2-201ENST00000623613 2777 ntBASIC20.49■□□□□ 0.87
SHC3Q92529 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHC3Q92529 AL353807.1-201ENST00000427475 662 ntBASIC20.49■□□□□ 0.87
SHC3Q92529 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.49■□□□□ 0.87
SHC3Q92529 KSR1P1-201ENST00000446298 240 ntBASIC20.49■□□□□ 0.87
SHC3Q92529 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.49■□□□□ 0.87
SHC3Q92529 AP002982.1-201ENST00000492365 877 ntBASIC20.49■□□□□ 0.87
SHC3Q92529 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.49■□□□□ 0.87
SHC3Q92529 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.49■□□□□ 0.87
SHC3Q92529 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms