Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AF213884.3-201ENST00000563833 479 ntBASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AL162741.1-201ENST00000565563 1558 ntBASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMIM4Q8WVI0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 AC139713.2-201ENST00000641328 2723 ntBASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SMIM4Q8WVI0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 HCG11-201ENST00000411553 5696 ntBASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 AC018553.1-201ENST00000616682 1458 ntBASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.43■□□□□ 0.22
SMIM4Q8WVI0 AC073592.3-201ENST00000625118 1834 ntBASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 YBX1P1-201ENST00000445822 960 ntBASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 AL591742.1-201ENST00000604433 565 ntBASIC16.42■□□□□ 0.22
SMIM4Q8WVI0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms