Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 SNORA78-201ENST00000459373 127 ntBASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SMARCC2Q8TAQ2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AL049812.1-201ENST00000432563 2267 ntBASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AL049637.2-201ENST00000641778 930 ntBASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SMARCC2Q8TAQ2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
SMARCC2Q8TAQ2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
SMARCC2Q8TAQ2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 AL353807.1-201ENST00000427475 662 ntBASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 MIR4497-201ENST00000583208 89 ntBASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 AC004408.2-201ENST00000623613 2777 ntBASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.51■■□□□ 1.19
SMARCC2Q8TAQ2 AC093503.3-201ENST00000624917 2352 ntBASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 AF186192.3-201ENST00000583427 947 ntBASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.5■■□□□ 1.19
SMARCC2Q8TAQ2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SMARCC2Q8TAQ2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms