Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 AC020907.5-201ENST00000624372 1936 ntBASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 OR2I1P-209ENST00000641730 5365 ntBASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 AC073314.1-201ENST00000568729 2216 ntBASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 AC004448.1-201ENST00000458332 883 ntBASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 AL662844.4-201ENST00000606367 2838 ntBASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SPTSSBQ8NFR3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
SPTSSBQ8NFR3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms