Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 ZNF815P-204ENST00000434898 1737 ntBASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AC104417.2-201ENST00000562989 1793 ntBASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 GCSHP5-201ENST00000443090 522 ntBASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AL158047.1-201ENST00000445918 881 ntBASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 AC142381.4-202ENST00000563973 229 ntBASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.1■□□□□ 0.49
SIMC1Q8NDZ2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 KRT16P5-201ENST00000455284 522 ntBASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 C1QL1P1-201ENST00000568105 661 ntBASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SIMC1Q8NDZ2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.08■□□□□ 0.49
SIMC1Q8NDZ2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SIMC1Q8NDZ2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms