Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 AC005521.1-201ENST00000393351 872 ntBASIC30.1■■■□□ 2.41
VPS8Q8N3P4 AL353719.1-201ENST00000566847 864 ntBASIC30.1■■■□□ 2.41
VPS8Q8N3P4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 AC116562.4-202ENST00000641738 218 ntBASIC30.1■■■□□ 2.41
VPS8Q8N3P4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
VPS8Q8N3P4 AC093484.2-201ENST00000580996 2166 ntBASIC30.1■■■□□ 2.41
VPS8Q8N3P4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 AC141586.3-201ENST00000562166 1838 ntBASIC30.09■■■□□ 2.41
VPS8Q8N3P4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 KRT18P57-201ENST00000443599 1254 ntBASIC30.09■■■□□ 2.41
VPS8Q8N3P4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 AC128688.1-201ENST00000487626 519 ntBASIC30.09■■■□□ 2.41
VPS8Q8N3P4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC30.09■■■□□ 2.41
VPS8Q8N3P4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 HMGA1P5-201ENST00000412453 271 ntBASIC30.08■■■□□ 2.41
VPS8Q8N3P4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 AP003041.3-201ENST00000527151 707 ntBASIC30.08■■■□□ 2.41
VPS8Q8N3P4 TK2-213ENST00000563369 882 ntTSL 5 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 AC005363.2-201ENST00000618631 242 ntBASIC30.08■■■□□ 2.41
VPS8Q8N3P4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC30.08■■■□□ 2.41
VPS8Q8N3P4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
VPS8Q8N3P4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 TSPY17P-201ENST00000450329 467 ntBASIC30.06■■■□□ 2.4
VPS8Q8N3P4 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.06■■■□□ 2.4
VPS8Q8N3P4 AC092865.7-201ENST00000641832 219 ntBASIC30.06■■■□□ 2.4
VPS8Q8N3P4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
VPS8Q8N3P4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
VPS8Q8N3P4 KRT18P21-201ENST00000515767 1272 ntBASIC30.05■■■□□ 2.4
VPS8Q8N3P4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
VPS8Q8N3P4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms