Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 KRT8P41-201ENST00000533985 1514 ntBASIC23.83■■□□□ 1.41
SMC5Q8IY18 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.83■■□□□ 1.4
SMC5Q8IY18 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
SMC5Q8IY18 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
SMC5Q8IY18 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SMC5Q8IY18 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.83■■□□□ 1.4
SMC5Q8IY18 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.82■■□□□ 1.4
SMC5Q8IY18 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 AC004264.1-201ENST00000608354 794 ntBASIC23.82■■□□□ 1.4
SMC5Q8IY18 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 AL023875.1-201ENST00000640777 796 ntBASIC23.82■■□□□ 1.4
SMC5Q8IY18 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.82■■□□□ 1.4
SMC5Q8IY18 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.82■■□□□ 1.4
SMC5Q8IY18 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC5Q8IY18 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 ESRRAP1-201ENST00000400596 1257 ntBASIC23.81■■□□□ 1.4
SMC5Q8IY18 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 TSPY21P-201ENST00000433481 731 ntBASIC23.81■■□□□ 1.4
SMC5Q8IY18 TSPY23P-201ENST00000440136 739 ntBASIC23.81■■□□□ 1.4
SMC5Q8IY18 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
SMC5Q8IY18 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC5Q8IY18 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 AC133681.1-201ENST00000465482 601 ntBASIC23.8■■□□□ 1.4
SMC5Q8IY18 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 AL512353.2-201ENST00000448759 1962 ntBASIC23.8■■□□□ 1.4
SMC5Q8IY18 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.8■■□□□ 1.4
SMC5Q8IY18 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC5Q8IY18 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 KRASP1-201ENST00000407852 552 ntBASIC23.79■■□□□ 1.4
SMC5Q8IY18 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 AC124016.1-201ENST00000609552 612 ntBASIC23.79■■□□□ 1.4
SMC5Q8IY18 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC5Q8IY18 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC5Q8IY18 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.78■■□□□ 1.4
SMC5Q8IY18 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SMC5Q8IY18 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms