Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYSMD3Q7Z3D4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 MIR4497-201ENST00000583208 89 ntBASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYSMD3Q7Z3D4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 TSPY7P-201ENST00000431358 1114 ntBASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 SNORA78-201ENST00000459373 127 ntBASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 Z85996.1-201ENST00000494644 937 ntBASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYSMD3Q7Z3D4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AC018445.3-201ENST00000624177 1945 ntBASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 AL031985.4-201ENST00000642138 673 ntBASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYSMD3Q7Z3D4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 AL032819.2-201ENST00000624543 2162 ntBASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LYSMD3Q7Z3D4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.28■□□□□ 0.68
LYSMD3Q7Z3D4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms