Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DCLRE1AQ6PJP8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
DCLRE1AQ6PJP8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DCLRE1AQ6PJP8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DCLRE1AQ6PJP8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DCLRE1AQ6PJP8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.55■□□□□ 0.88
DCLRE1AQ6PJP8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 AL512604.3-201ENST00000569583 964 ntBASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DCLRE1AQ6PJP8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 AC087388.1-201ENST00000571370 1112 ntBASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DCLRE1AQ6PJP8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 AK4P3-201ENST00000418260 669 ntBASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DCLRE1AQ6PJP8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms