Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATP13A4Q4VNC1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 KRASP1-201ENST00000407852 552 ntBASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP13A4Q4VNC1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 C1QL1P1-201ENST00000568105 661 ntBASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 AC006058.3-201ENST00000606217 1069 ntBASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 AC073648.6-201ENST00000641589 218 ntBASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP13A4Q4VNC1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ATP13A4Q4VNC1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATP13A4Q4VNC1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20■□□□□ 0.79
ATP13A4Q4VNC1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms