Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.09■■□□□ 1.13
USH1GQ495M9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.09■■□□□ 1.13
USH1GQ495M9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.09■■□□□ 1.13
USH1GQ495M9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.09■■□□□ 1.13
USH1GQ495M9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.09■■□□□ 1.13
USH1GQ495M9 CKBP1-201ENST00000565489 1086 ntBASIC22.09■■□□□ 1.13
USH1GQ495M9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 TREX1-205ENST00000625293 1783 ntBASIC22.09■■□□□ 1.13
USH1GQ495M9 AFG3L1P-217ENST00000557444 2447 ntBASIC22.09■■□□□ 1.13
USH1GQ495M9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.09■■□□□ 1.13
USH1GQ495M9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
USH1GQ495M9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USH1GQ495M9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
USH1GQ495M9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
USH1GQ495M9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
USH1GQ495M9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
USH1GQ495M9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
USH1GQ495M9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.08■■□□□ 1.13
USH1GQ495M9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
USH1GQ495M9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
USH1GQ495M9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.08■■□□□ 1.13
USH1GQ495M9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.08■■□□□ 1.13
USH1GQ495M9 AC116562.4-202ENST00000641738 218 ntBASIC22.08■■□□□ 1.13
USH1GQ495M9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.08■■□□□ 1.13
USH1GQ495M9 AIRN-201ENST00000601203 4374 ntBASIC22.08■■□□□ 1.12
USH1GQ495M9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.08■■□□□ 1.12
USH1GQ495M9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
USH1GQ495M9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
USH1GQ495M9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.07■■□□□ 1.12
USH1GQ495M9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
USH1GQ495M9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
USH1GQ495M9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.07■■□□□ 1.12
USH1GQ495M9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.07■■□□□ 1.12
USH1GQ495M9 CCR12P-201ENST00000446203 998 ntBASIC22.07■■□□□ 1.12
USH1GQ495M9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.07■■□□□ 1.12
USH1GQ495M9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
USH1GQ495M9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
USH1GQ495M9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
USH1GQ495M9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 AC073508.3-201ENST00000619697 1419 ntBASIC22.06■■□□□ 1.12
USH1GQ495M9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.06■■□□□ 1.12
USH1GQ495M9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 LIN28AP1-201ENST00000429574 405 ntBASIC22.06■■□□□ 1.12
USH1GQ495M9 SLC25A1P2-201ENST00000430693 912 ntBASIC22.06■■□□□ 1.12
USH1GQ495M9 ATP5G1P1-201ENST00000448724 379 ntBASIC22.06■■□□□ 1.12
USH1GQ495M9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.06■■□□□ 1.12
USH1GQ495M9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
USH1GQ495M9 AC073130.3-201ENST00000624389 2278 ntBASIC22.06■■□□□ 1.12
USH1GQ495M9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
USH1GQ495M9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
USH1GQ495M9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.06■■□□□ 1.12
USH1GQ495M9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.05■■□□□ 1.12
USH1GQ495M9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.05■■□□□ 1.12
USH1GQ495M9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.05■■□□□ 1.12
USH1GQ495M9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.05■■□□□ 1.12
USH1GQ495M9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
USH1GQ495M9 AL158211.5-201ENST00000623583 2518 ntBASIC22.05■■□□□ 1.12
USH1GQ495M9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms