Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.67■□□□□ 0.26
RSPO1Q2MKA7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RSPO1Q2MKA7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RSPO1Q2MKA7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 NIFKP9-201ENST00000419265 221 ntBASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.66■□□□□ 0.26
RSPO1Q2MKA7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 KRT18P29-201ENST00000397031 1267 ntBASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 AC004980.1-204ENST00000429707 299 ntBASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 TSPY23P-201ENST00000440136 739 ntBASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RSPO1Q2MKA7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
RSPO1Q2MKA7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RSPO1Q2MKA7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RSPO1Q2MKA7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms