Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 AC087289.5-201ENST00000586076 3175 ntBASIC12.72□□□□□ -0.37
SYCNQ0VAF6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.72□□□□□ -0.37
SYCNQ0VAF6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 POM121L13P-201ENST00000422362 380 ntBASIC12.71□□□□□ -0.37
SYCNQ0VAF6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 RNA5SP413-201ENST00000516373 109 ntBASIC12.71□□□□□ -0.37
SYCNQ0VAF6 UNC93B5-201ENST00000530315 699 ntBASIC12.71□□□□□ -0.37
SYCNQ0VAF6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SYCNQ0VAF6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SYCNQ0VAF6 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.7□□□□□ -0.38
SYCNQ0VAF6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 KRT17P3-201ENST00000420566 1262 ntBASIC12.7□□□□□ -0.38
SYCNQ0VAF6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 KRT18P16-201ENST00000510337 1294 ntBASIC12.7□□□□□ -0.38
SYCNQ0VAF6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC12.7□□□□□ -0.38
SYCNQ0VAF6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SYCNQ0VAF6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SYCNQ0VAF6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms