Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC25A1P53007 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SLC25A1P53007 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 AC098934.4-201ENST00000564127 592 ntBASIC17.09■□□□□ 0.33
SLC25A1P53007 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC25A1P53007 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC25A1P53007 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC25A1P53007 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC25A1P53007 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SLC25A1P53007 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC25A1P53007 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC25A1P53007 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC25A1P53007 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SLC25A1P53007 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
SLC25A1P53007 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC25A1P53007 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC25A1P53007 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC25A1P53007 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.08■□□□□ 0.33
SLC25A1P53007 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC25A1P53007 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC25A1P53007 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 AC133041.1-202ENST00000642053 222 ntBASIC17.08■□□□□ 0.32
SLC25A1P53007 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC25A1P53007 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC25A1P53007 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC25A1P53007 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC25A1P53007 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SLC25A1P53007 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC25A1P53007 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC25A1P53007 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC25A1P53007 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC25A1P53007 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC25A1P53007 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC25A1P53007 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 AL512353.2-201ENST00000448759 1962 ntBASIC17.06■□□□□ 0.32
SLC25A1P53007 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC25A1P53007 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC25A1P53007 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC25A1P53007 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC25A1P53007 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 AIRN-201ENST00000601203 4374 ntBASIC17.06■□□□□ 0.32
SLC25A1P53007 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC25A1P53007 AC069152.1-201ENST00000438030 544 ntBASIC17.06■□□□□ 0.32
SLC25A1P53007 UNC93B4-201ENST00000505679 747 ntBASIC17.06■□□□□ 0.32
SLC25A1P53007 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms