Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR2JP52435 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR2JP52435 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.39■□□□□ 0.53
POLR2JP52435 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
POLR2JP52435 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.39■□□□□ 0.53
POLR2JP52435 AC022517.1-201ENST00000592429 346 ntBASIC18.39■□□□□ 0.53
POLR2JP52435 AC090164.3-201ENST00000610780 2143 ntBASIC18.39■□□□□ 0.53
POLR2JP52435 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.39■□□□□ 0.53
POLR2JP52435 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
POLR2JP52435 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
POLR2JP52435 AP006587.1-201ENST00000534129 1502 ntBASIC18.39■□□□□ 0.53
POLR2JP52435 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR2JP52435 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
POLR2JP52435 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR2JP52435 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR2JP52435 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.38■□□□□ 0.53
POLR2JP52435 AL050303.2-201ENST00000619798 666 ntBASIC18.38■□□□□ 0.53
POLR2JP52435 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2JP52435 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.38■□□□□ 0.53
POLR2JP52435 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.38■□□□□ 0.53
POLR2JP52435 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
POLR2JP52435 AC005082.1-201ENST00000413042 2259 ntBASIC18.38■□□□□ 0.53
POLR2JP52435 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
POLR2JP52435 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
POLR2JP52435 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.37■□□□□ 0.53
POLR2JP52435 YBX1P10-201ENST00000444752 975 ntBASIC18.37■□□□□ 0.53
POLR2JP52435 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.37■□□□□ 0.53
POLR2JP52435 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 RAP2CP1-201ENST00000605103 478 ntBASIC18.37■□□□□ 0.53
POLR2JP52435 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
POLR2JP52435 AC080038.1-201ENST00000611274 1154 ntBASIC18.37■□□□□ 0.53
POLR2JP52435 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
POLR2JP52435 AC079598.2-202ENST00000546624 1451 ntBASIC18.37■□□□□ 0.53
POLR2JP52435 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 AL512353.2-201ENST00000448759 1962 ntBASIC18.37■□□□□ 0.53
POLR2JP52435 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
POLR2JP52435 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
POLR2JP52435 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
POLR2JP52435 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
POLR2JP52435 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
POLR2JP52435 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
POLR2JP52435 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms