Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN4P51793 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.25■□□□□ 0.83
CLCN4P51793 AL136038.3-201ENST00000561909 1096 ntBASIC20.25■□□□□ 0.83
CLCN4P51793 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN4P51793 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN4P51793 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLCN4P51793 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN4P51793 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLCN4P51793 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN4P51793 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 AC112907.2-201ENST00000448639 330 ntBASIC20.24■□□□□ 0.83
CLCN4P51793 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN4P51793 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN4P51793 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCN4P51793 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN4P51793 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCN4P51793 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.24■□□□□ 0.83
CLCN4P51793 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLCN4P51793 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN4P51793 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN4P51793 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLCN4P51793 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CLCN4P51793 AL512408.1-201ENST00000569378 2000 ntBASIC20.24■□□□□ 0.83
CLCN4P51793 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.23■□□□□ 0.83
CLCN4P51793 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
CLCN4P51793 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLCN4P51793 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 DUSP5P1-201ENST00000441325 1139 ntBASIC20.23■□□□□ 0.83
CLCN4P51793 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CLCN4P51793 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCN4P51793 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCN4P51793 VENTXP5-201ENST00000523979 775 ntBASIC20.23■□□□□ 0.83
CLCN4P51793 GCSHP2-201ENST00000560971 527 ntBASIC20.23■□□□□ 0.83
CLCN4P51793 AC083849.1-201ENST00000615227 514 ntBASIC20.23■□□□□ 0.83
CLCN4P51793 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CLCN4P51793 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLCN4P51793 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCN4P51793 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCN4P51793 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 STARP1-201ENST00000397973 869 ntBASIC20.22■□□□□ 0.83
CLCN4P51793 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCN4P51793 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 AC069148.1-201ENST00000608741 768 ntBASIC20.22■□□□□ 0.83
CLCN4P51793 HYMAI.1-201ENST00000620949 238 ntBASIC20.22■□□□□ 0.83
CLCN4P51793 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCN4P51793 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLCN4P51793 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCN4P51793 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CLCN4P51793 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CLCN4P51793 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN4P51793 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCN4P51793 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCN4P51793 HCG4P8-203ENST00000443049 980 ntBASIC20.21■□□□□ 0.83
CLCN4P51793 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN4P51793 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCN4P51793 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCN4P51793 ZNF444P1-201ENST00000559497 298 ntBASIC20.21■□□□□ 0.83
CLCN4P51793 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCN4P51793 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms