Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF144AP50876 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF144AP50876 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 ZNF815P-204ENST00000434898 1737 ntBASIC17.86■□□□□ 0.45
RNF144AP50876 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF144AP50876 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF144AP50876 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF144AP50876 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF144AP50876 AC004408.2-201ENST00000623613 2777 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF144AP50876 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF144AP50876 AL049812.1-201ENST00000432563 2267 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 KRT8P8-201ENST00000434750 1448 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 TUBB8P6-201ENST00000436895 1288 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 KRT18P16-201ENST00000510337 1294 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF144AP50876 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 C1QBPP2-201ENST00000528754 825 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF144AP50876 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF144AP50876 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RNF144AP50876 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF144AP50876 TEX21P-204ENST00000641479 1693 ntBASIC17.85■□□□□ 0.45
RNF144AP50876 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF144AP50876 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF144AP50876 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
RNF144AP50876 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 FAM201B-201ENST00000458407 597 ntBASIC17.84■□□□□ 0.45
RNF144AP50876 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF144AP50876 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF144AP50876 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF144AP50876 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF144AP50876 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF144AP50876 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RNF144AP50876 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF144AP50876 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
RNF144AP50876 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.83■□□□□ 0.45
RNF144AP50876 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF144AP50876 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RNF144AP50876 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF144AP50876 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF144AP50876 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF144AP50876 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF144AP50876 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF144AP50876 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF144AP50876 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF144AP50876 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms