Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC1A6P48664 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SLC1A6P48664 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC1A6P48664 LSM12P1-201ENST00000411836 588 ntBASIC18.9■□□□□ 0.62
SLC1A6P48664 AC006015.1-201ENST00000429970 570 ntBASIC18.9■□□□□ 0.62
SLC1A6P48664 KRT18P5-201ENST00000436075 1291 ntBASIC18.9■□□□□ 0.62
SLC1A6P48664 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC1A6P48664 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC1A6P48664 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC1A6P48664 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC1A6P48664 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SLC1A6P48664 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC1A6P48664 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SLC1A6P48664 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.89■□□□□ 0.62
SLC1A6P48664 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A6P48664 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC1A6P48664 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC1A6P48664 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.89■□□□□ 0.61
SLC1A6P48664 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 AL354751.1-201ENST00000412768 1863 ntBASIC18.89■□□□□ 0.61
SLC1A6P48664 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SLC1A6P48664 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC1A6P48664 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC1A6P48664 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC1A6P48664 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A6P48664 AL133373.2-201ENST00000623187 2828 ntBASIC18.88■□□□□ 0.61
SLC1A6P48664 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SLC1A6P48664 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A6P48664 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.88■□□□□ 0.61
SLC1A6P48664 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC1A6P48664 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 AC087623.3-201ENST00000607047 1098 ntBASIC18.88■□□□□ 0.61
SLC1A6P48664 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC1A6P48664 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC1A6P48664 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms