Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.32□□□□□ -0.28
PCP4P48539 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.32□□□□□ -0.28
PCP4P48539 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PCP4P48539 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PCP4P48539 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.31□□□□□ -0.28
PCP4P48539 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PCP4P48539 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 AC073869.1-201ENST00000415574 2762 ntBASIC13.31□□□□□ -0.28
PCP4P48539 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
PCP4P48539 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PCP4P48539 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC13.31□□□□□ -0.28
PCP4P48539 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PCP4P48539 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PCP4P48539 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.3□□□□□ -0.28
PCP4P48539 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PCP4P48539 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 AC126763.1-201ENST00000552015 2118 ntBASIC13.3□□□□□ -0.28
PCP4P48539 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 AC093484.2-201ENST00000580996 2166 ntBASIC13.3□□□□□ -0.28
PCP4P48539 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.3□□□□□ -0.28
PCP4P48539 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 AC099778.1-201ENST00000568593 1911 ntBASIC13.3□□□□□ -0.28
PCP4P48539 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC13.3□□□□□ -0.28
PCP4P48539 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.3□□□□□ -0.28
PCP4P48539 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 AL359183.1-201ENST00000623796 2132 ntBASIC13.3□□□□□ -0.28
PCP4P48539 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
PCP4P48539 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PCP4P48539 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 PAUPAR-201ENST00000630360 2965 ntBASIC13.29□□□□□ -0.28
PCP4P48539 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.29□□□□□ -0.28
PCP4P48539 AL009178.2-201ENST00000597278 2719 ntBASIC13.29□□□□□ -0.28
PCP4P48539 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PCP4P48539 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.29□□□□□ -0.28
PCP4P48539 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms