Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 TPM4P1-201ENST00000436100 807 ntBASIC24.42■■□□□ 1.5
COL15A1P39059 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 GCSHP2-201ENST00000560971 527 ntBASIC24.42■■□□□ 1.5
COL15A1P39059 MIR4674-201ENST00000582457 87 ntBASIC24.42■■□□□ 1.5
COL15A1P39059 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.42■■□□□ 1.5
COL15A1P39059 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.42■■□□□ 1.5
COL15A1P39059 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COL15A1P39059 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.42■■□□□ 1.5
COL15A1P39059 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.42■■□□□ 1.5
COL15A1P39059 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COL15A1P39059 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC24.42■■□□□ 1.5
COL15A1P39059 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.42■■□□□ 1.5
COL15A1P39059 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC24.42■■□□□ 1.5
COL15A1P39059 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.42■■□□□ 1.5
COL15A1P39059 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.42■■□□□ 1.5
COL15A1P39059 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL15A1P39059 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.41■■□□□ 1.5
COL15A1P39059 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL15A1P39059 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL15A1P39059 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC24.41■■□□□ 1.5
COL15A1P39059 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
COL15A1P39059 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.41■■□□□ 1.5
COL15A1P39059 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
COL15A1P39059 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 AL391422.3-201ENST00000603791 2761 ntBASIC24.41■■□□□ 1.5
COL15A1P39059 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL15A1P39059 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL15A1P39059 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
COL15A1P39059 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC24.41■■□□□ 1.5
COL15A1P39059 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
COL15A1P39059 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
COL15A1P39059 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.4■■□□□ 1.5
COL15A1P39059 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.4■■□□□ 1.5
COL15A1P39059 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC24.4■■□□□ 1.5
COL15A1P39059 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.4■■□□□ 1.5
COL15A1P39059 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
COL15A1P39059 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.4■■□□□ 1.5
COL15A1P39059 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.4■■□□□ 1.5
COL15A1P39059 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL15A1P39059 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
COL15A1P39059 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.5
COL15A1P39059 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL15A1P39059 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
COL15A1P39059 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC24.39■■□□□ 1.5
COL15A1P39059 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.39■■□□□ 1.49
COL15A1P39059 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.39■■□□□ 1.49
COL15A1P39059 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.39■■□□□ 1.49
COL15A1P39059 SPDYE13P-201ENST00000445314 798 ntBASIC24.39■■□□□ 1.49
COL15A1P39059 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.39■■□□□ 1.49
COL15A1P39059 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC24.39■■□□□ 1.49
COL15A1P39059 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.39■■□□□ 1.49
COL15A1P39059 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.39■■□□□ 1.49
COL15A1P39059 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.39■■□□□ 1.49
COL15A1P39059 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.39■■□□□ 1.49
COL15A1P39059 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC24.39■■□□□ 1.49
COL15A1P39059 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
COL15A1P39059 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.38■■□□□ 1.49
COL15A1P39059 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.38■■□□□ 1.49
COL15A1P39059 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL15A1P39059 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
COL15A1P39059 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL15A1P39059 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
COL15A1P39059 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms