Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCK1P35558 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.22■□□□□ 0.83
PCK1P35558 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.22■□□□□ 0.83
PCK1P35558 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 AC233263.1-201ENST00000578059 224 ntBASIC20.22■□□□□ 0.83
PCK1P35558 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 AC098818.2-201ENST00000564925 2320 ntBASIC20.22■□□□□ 0.83
PCK1P35558 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.22■□□□□ 0.83
PCK1P35558 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.22■□□□□ 0.83
PCK1P35558 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCK1P35558 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCK1P35558 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.22■□□□□ 0.83
PCK1P35558 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCK1P35558 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCK1P35558 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.21■□□□□ 0.83
PCK1P35558 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PCK1P35558 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.21■□□□□ 0.83
PCK1P35558 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.21■□□□□ 0.83
PCK1P35558 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCK1P35558 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCK1P35558 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCK1P35558 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
PCK1P35558 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
PCK1P35558 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.2■□□□□ 0.82
PCK1P35558 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.2■□□□□ 0.82
PCK1P35558 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.2■□□□□ 0.82
PCK1P35558 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.2■□□□□ 0.82
PCK1P35558 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.2■□□□□ 0.82
PCK1P35558 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.2■□□□□ 0.82
PCK1P35558 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.2■□□□□ 0.82
PCK1P35558 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCK1P35558 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.2■□□□□ 0.82
PCK1P35558 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCK1P35558 AC090340.1-201ENST00000620778 4980 ntBASIC20.2■□□□□ 0.82
PCK1P35558 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 HCG11-201ENST00000411553 5696 ntBASIC20.2■□□□□ 0.82
PCK1P35558 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCK1P35558 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
PCK1P35558 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.19■□□□□ 0.82
PCK1P35558 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 AC004264.1-201ENST00000608354 794 ntBASIC20.19■□□□□ 0.82
PCK1P35558 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCK1P35558 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCK1P35558 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
PCK1P35558 AC141586.3-201ENST00000562166 1838 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms