Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 PRORSD1P-201ENST00000295112 541 ntBASIC17.78■□□□□ 0.44
LCN1P31025 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.78■□□□□ 0.44
LCN1P31025 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.78■□□□□ 0.44
LCN1P31025 AL160286.2-201ENST00000567150 934 ntBASIC17.78■□□□□ 0.44
LCN1P31025 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.78■□□□□ 0.44
LCN1P31025 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.78■□□□□ 0.44
LCN1P31025 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 FAM197Y4-202ENST00000622692 608 ntBASIC17.78■□□□□ 0.44
LCN1P31025 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.78■□□□□ 0.44
LCN1P31025 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LCN1P31025 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.78■□□□□ 0.44
LCN1P31025 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.78■□□□□ 0.44
LCN1P31025 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.78■□□□□ 0.44
LCN1P31025 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCN1P31025 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.77■□□□□ 0.44
LCN1P31025 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LCN1P31025 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LCN1P31025 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LCN1P31025 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.77■□□□□ 0.44
LCN1P31025 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 NIFKP9-201ENST00000419265 221 ntBASIC17.77■□□□□ 0.44
LCN1P31025 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 KSR1P1-201ENST00000446298 240 ntBASIC17.77■□□□□ 0.44
LCN1P31025 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.77■□□□□ 0.44
LCN1P31025 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.77■□□□□ 0.44
LCN1P31025 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.77■□□□□ 0.44
LCN1P31025 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.77■□□□□ 0.44
LCN1P31025 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.77■□□□□ 0.44
LCN1P31025 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.77■□□□□ 0.44
LCN1P31025 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LCN1P31025 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCN1P31025 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCN1P31025 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCN1P31025 AC005332.7-201ENST00000614046 2005 ntBASIC17.77■□□□□ 0.43
LCN1P31025 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCN1P31025 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCN1P31025 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LCN1P31025 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LCN1P31025 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCN1P31025 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.77■□□□□ 0.43
LCN1P31025 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.76■□□□□ 0.43
LCN1P31025 HTR7P1-201ENST00000538670 1336 ntBASIC17.76■□□□□ 0.43
LCN1P31025 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCN1P31025 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.76■□□□□ 0.43
LCN1P31025 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 ABHD17AP1-201ENST00000358206 933 ntBASIC17.76■□□□□ 0.43
LCN1P31025 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCN1P31025 UBE2SP1-201ENST00000450587 669 ntBASIC17.76■□□□□ 0.43
LCN1P31025 AP002982.1-201ENST00000492365 877 ntBASIC17.76■□□□□ 0.43
LCN1P31025 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.76■□□□□ 0.43
LCN1P31025 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.76■□□□□ 0.43
LCN1P31025 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.76■□□□□ 0.43
LCN1P31025 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.76■□□□□ 0.43
LCN1P31025 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCN1P31025 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.76■□□□□ 0.43
LCN1P31025 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
LCN1P31025 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.75■□□□□ 0.43
LCN1P31025 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LCN1P31025 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.75■□□□□ 0.43
LCN1P31025 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LCN1P31025 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCN1P31025 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms