Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DPA1P20036 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 KSR1P1-201ENST00000446298 240 ntBASIC19.4■□□□□ 0.7
HLA-DPA1P20036 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.4■□□□□ 0.7
HLA-DPA1P20036 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DPA1P20036 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.39■□□□□ 0.7
HLA-DPA1P20036 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DPA1P20036 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HLA-DPA1P20036 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HLA-DPA1P20036 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HLA-DPA1P20036 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 UBE2SP1-201ENST00000450587 669 ntBASIC19.39■□□□□ 0.69
HLA-DPA1P20036 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HLA-DPA1P20036 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 AL158047.1-201ENST00000445918 881 ntBASIC19.38■□□□□ 0.69
HLA-DPA1P20036 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.38■□□□□ 0.69
HLA-DPA1P20036 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms