Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.77■□□□□ 0.44
UBL4AP11441 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.77■□□□□ 0.44
UBL4AP11441 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBL4AP11441 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 AC124016.1-201ENST00000609552 612 ntBASIC17.77■□□□□ 0.44
UBL4AP11441 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.77■□□□□ 0.44
UBL4AP11441 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.77■□□□□ 0.44
UBL4AP11441 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBL4AP11441 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBL4AP11441 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBL4AP11441 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UBL4AP11441 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBL4AP11441 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.77■□□□□ 0.43
UBL4AP11441 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
UBL4AP11441 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.77■□□□□ 0.43
UBL4AP11441 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
UBL4AP11441 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.76■□□□□ 0.43
UBL4AP11441 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.76■□□□□ 0.43
UBL4AP11441 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.76■□□□□ 0.43
UBL4AP11441 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.76■□□□□ 0.43
UBL4AP11441 TSPY20P-201ENST00000450910 630 ntBASIC17.76■□□□□ 0.43
UBL4AP11441 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UBL4AP11441 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
UBL4AP11441 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
UBL4AP11441 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
UBL4AP11441 AL032819.2-201ENST00000624543 2162 ntBASIC17.76■□□□□ 0.43
UBL4AP11441 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBL4AP11441 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
UBL4AP11441 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 AC120498.9-201ENST00000339021 3867 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 AC106820.2-201ENST00000563775 3264 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL4AP11441 AC011270.2-201ENST00000624293 2550 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
UBL4AP11441 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
UBL4AP11441 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.75■□□□□ 0.43
UBL4AP11441 AC133681.1-201ENST00000465482 601 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 C1QBPP2-201ENST00000528754 825 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL4AP11441 C1QL1P1-201ENST00000568105 661 ntBASIC17.75■□□□□ 0.43
UBL4AP11441 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.75■□□□□ 0.43
UBL4AP11441 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBL4AP11441 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.75■□□□□ 0.43
UBL4AP11441 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBL4AP11441 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.75■□□□□ 0.43
UBL4AP11441 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.75■□□□□ 0.43
UBL4AP11441 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
UBL4AP11441 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBL4AP11441 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
UBL4AP11441 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBL4AP11441 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBL4AP11441 KRT18P29-201ENST00000397031 1267 ntBASIC17.74■□□□□ 0.43
UBL4AP11441 KRT16P5-201ENST00000455284 522 ntBASIC17.74■□□□□ 0.43
UBL4AP11441 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.74■□□□□ 0.43
UBL4AP11441 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBL4AP11441 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms