Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A1P02452 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL1A1P02452 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.22■■□□□ 1.31
COL1A1P02452 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A1P02452 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A1P02452 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.21■■□□□ 1.31
COL1A1P02452 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A1P02452 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A1P02452 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A1P02452 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL1A1P02452 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
COL1A1P02452 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.2■■□□□ 1.3
COL1A1P02452 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.2■■□□□ 1.3
COL1A1P02452 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
COL1A1P02452 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
COL1A1P02452 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
COL1A1P02452 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.2■■□□□ 1.3
COL1A1P02452 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.2■■□□□ 1.3
COL1A1P02452 AC008622.2-201ENST00000617006 1229 ntBASIC23.2■■□□□ 1.3
COL1A1P02452 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.2■■□□□ 1.3
COL1A1P02452 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.2■■□□□ 1.3
COL1A1P02452 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.2■■□□□ 1.3
COL1A1P02452 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A1P02452 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.19■■□□□ 1.3
COL1A1P02452 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.19■■□□□ 1.3
COL1A1P02452 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A1P02452 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
COL1A1P02452 HOMER2P1-201ENST00000455653 964 ntBASIC23.19■■□□□ 1.3
COL1A1P02452 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.19■■□□□ 1.3
COL1A1P02452 KRT18P56-201ENST00000507275 550 ntBASIC23.19■■□□□ 1.3
COL1A1P02452 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.19■■□□□ 1.3
COL1A1P02452 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.19■■□□□ 1.3
COL1A1P02452 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A1P02452 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A1P02452 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A1P02452 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A1P02452 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.18■■□□□ 1.3
COL1A1P02452 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.18■■□□□ 1.3
COL1A1P02452 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.18■■□□□ 1.3
COL1A1P02452 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
COL1A1P02452 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
COL1A1P02452 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.18■■□□□ 1.3
COL1A1P02452 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.18■■□□□ 1.3
COL1A1P02452 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.18■■□□□ 1.3
COL1A1P02452 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.18■■□□□ 1.3
COL1A1P02452 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.18■■□□□ 1.3
COL1A1P02452 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.18■■□□□ 1.3
COL1A1P02452 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.18■■□□□ 1.3
COL1A1P02452 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A1P02452 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.17■■□□□ 1.3
COL1A1P02452 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 AL023973.1-201ENST00000624619 620 ntBASIC23.17■■□□□ 1.3
COL1A1P02452 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.17■■□□□ 1.3
COL1A1P02452 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.17■■□□□ 1.3
COL1A1P02452 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
COL1A1P02452 Z82202.1-201ENST00000623446 1880 ntBASIC23.17■■□□□ 1.3
COL1A1P02452 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
COL1A1P02452 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.17■■□□□ 1.3
COL1A1P02452 KRT18P48-201ENST00000434763 852 ntBASIC23.17■■□□□ 1.3
COL1A1P02452 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 FAM86EP-206ENST00000510506 987 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms