Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 AL020996.1-203ENST00000536896 2307 ntBASIC20.03■□□□□ 0.8
LRCH4O75427 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRCH4O75427 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LRCH4O75427 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRCH4O75427 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LRCH4O75427 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.02■□□□□ 0.8
LRCH4O75427 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.02■□□□□ 0.8
LRCH4O75427 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.02■□□□□ 0.8
LRCH4O75427 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
LRCH4O75427 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRCH4O75427 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRCH4O75427 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRCH4O75427 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.02■□□□□ 0.79
LRCH4O75427 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
LRCH4O75427 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.02■□□□□ 0.79
LRCH4O75427 KRT8P41-201ENST00000533985 1514 ntBASIC20.02■□□□□ 0.79
LRCH4O75427 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH4O75427 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.01■□□□□ 0.79
LRCH4O75427 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH4O75427 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 Z85996.1-201ENST00000494644 937 ntBASIC20.01■□□□□ 0.79
LRCH4O75427 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.01■□□□□ 0.79
LRCH4O75427 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRCH4O75427 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LRCH4O75427 AL445675.2-201ENST00000620291 557 ntBASIC20.01■□□□□ 0.79
LRCH4O75427 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
LRCH4O75427 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH4O75427 AC006333.2-201ENST00000607957 2099 ntBASIC20.01■□□□□ 0.79
LRCH4O75427 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRCH4O75427 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.01■□□□□ 0.79
LRCH4O75427 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 NIFKP9-201ENST00000419265 221 ntBASIC20■□□□□ 0.79
LRCH4O75427 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20■□□□□ 0.79
LRCH4O75427 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRCH4O75427 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20■□□□□ 0.79
LRCH4O75427 HTR7P1-201ENST00000538670 1336 ntBASIC20■□□□□ 0.79
LRCH4O75427 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH4O75427 FEM1AP3-201ENST00000403722 1741 ntBASIC19.99■□□□□ 0.79
LRCH4O75427 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRCH4O75427 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LRCH4O75427 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRCH4O75427 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.99■□□□□ 0.79
LRCH4O75427 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH4O75427 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH4O75427 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.99■□□□□ 0.79
LRCH4O75427 AL353708.3-201ENST00000610272 989 ntBASIC19.99■□□□□ 0.79
LRCH4O75427 AL359736.2-201ENST00000621992 437 ntBASIC19.99■□□□□ 0.79
LRCH4O75427 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.99■□□□□ 0.79
LRCH4O75427 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRCH4O75427 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms