Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM13O60858 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM13O60858 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM13O60858 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM13O60858 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM13O60858 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM13O60858 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM13O60858 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM13O60858 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM13O60858 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.92■□□□□ 0.62
TRIM13O60858 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 AC124283.5-201ENST00000624661 1809 ntBASIC18.92■□□□□ 0.62
TRIM13O60858 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM13O60858 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM13O60858 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM13O60858 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM13O60858 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM13O60858 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM13O60858 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM13O60858 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 AC135050.7-201ENST00000624508 2218 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
TRIM13O60858 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM13O60858 RPS2P52-201ENST00000469610 820 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 AL162430.1-201ENST00000480705 870 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM13O60858 RARRES2P6-201ENST00000567333 442 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 AC006557.6-201ENST00000623071 864 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 AL512353.2-201ENST00000448759 1962 ntBASIC18.91■□□□□ 0.62
TRIM13O60858 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM13O60858 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM13O60858 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM13O60858 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM13O60858 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 AP006587.1-201ENST00000534129 1502 ntBASIC18.9■□□□□ 0.62
TRIM13O60858 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM13O60858 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 YBX1P10-201ENST00000444752 975 ntBASIC18.9■□□□□ 0.62
TRIM13O60858 AC022517.1-201ENST00000592429 346 ntBASIC18.9■□□□□ 0.62
TRIM13O60858 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM13O60858 RAP2CP1-201ENST00000605103 478 ntBASIC18.9■□□□□ 0.62
TRIM13O60858 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.9■□□□□ 0.62
TRIM13O60858 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TRIM13O60858 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms