Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.24■□□□□ 0.67
LDB2O43679 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LDB2O43679 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 AC004980.1-204ENST00000429707 299 ntBASIC19.24■□□□□ 0.67
LDB2O43679 AL158047.1-201ENST00000445918 881 ntBASIC19.24■□□□□ 0.67
LDB2O43679 KSR1P1-201ENST00000446298 240 ntBASIC19.24■□□□□ 0.67
LDB2O43679 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 AP002982.1-201ENST00000492365 877 ntBASIC19.24■□□□□ 0.67
LDB2O43679 AF186192.3-201ENST00000583427 947 ntBASIC19.24■□□□□ 0.67
LDB2O43679 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.24■□□□□ 0.67
LDB2O43679 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB2O43679 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB2O43679 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB2O43679 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
LDB2O43679 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.24■□□□□ 0.67
LDB2O43679 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
LDB2O43679 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LDB2O43679 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LDB2O43679 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LDB2O43679 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB2O43679 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LDB2O43679 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.23■□□□□ 0.67
LDB2O43679 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 AL353807.1-201ENST00000427475 662 ntBASIC19.23■□□□□ 0.67
LDB2O43679 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB2O43679 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.23■□□□□ 0.67
LDB2O43679 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB2O43679 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.23■□□□□ 0.67
LDB2O43679 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.23■□□□□ 0.67
LDB2O43679 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.23■□□□□ 0.67
LDB2O43679 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LDB2O43679 IRX1P1-201ENST00000438849 1838 ntBASIC19.23■□□□□ 0.67
LDB2O43679 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LDB2O43679 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
LDB2O43679 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
LDB2O43679 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.22■□□□□ 0.67
LDB2O43679 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.22■□□□□ 0.67
LDB2O43679 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.22■□□□□ 0.67
LDB2O43679 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.22■□□□□ 0.67
LDB2O43679 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.22■□□□□ 0.67
LDB2O43679 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.22■□□□□ 0.67
LDB2O43679 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDB2O43679 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LDB2O43679 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.21■□□□□ 0.67
LDB2O43679 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.21■□□□□ 0.67
LDB2O43679 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.21■□□□□ 0.67
LDB2O43679 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDB2O43679 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms