Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COCHO43405 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.9■□□□□ 0.78
COCHO43405 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COCHO43405 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.9■□□□□ 0.78
COCHO43405 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COCHO43405 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.9■□□□□ 0.78
COCHO43405 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COCHO43405 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.89■□□□□ 0.77
COCHO43405 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.89■□□□□ 0.77
COCHO43405 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.89■□□□□ 0.77
COCHO43405 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.89■□□□□ 0.77
COCHO43405 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.89■□□□□ 0.77
COCHO43405 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.89■□□□□ 0.77
COCHO43405 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 AC006011.2-201ENST00000621313 1158 ntBASIC19.89■□□□□ 0.77
COCHO43405 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COCHO43405 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.88■□□□□ 0.77
COCHO43405 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.88■□□□□ 0.77
COCHO43405 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.88■□□□□ 0.77
COCHO43405 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 AP003041.3-201ENST00000527151 707 ntBASIC19.88■□□□□ 0.77
COCHO43405 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
COCHO43405 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.88■□□□□ 0.77
COCHO43405 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 AL445228.2-201ENST00000605589 952 ntBASIC19.88■□□□□ 0.77
COCHO43405 AL138966.2-201ENST00000621997 464 ntBASIC19.88■□□□□ 0.77
COCHO43405 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
COCHO43405 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.88■□□□□ 0.77
COCHO43405 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COCHO43405 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COCHO43405 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COCHO43405 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.87■□□□□ 0.77
COCHO43405 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
COCHO43405 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.87■□□□□ 0.77
COCHO43405 TSPY21P-201ENST00000433481 731 ntBASIC19.87■□□□□ 0.77
COCHO43405 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.87■□□□□ 0.77
COCHO43405 DUX4L26-201ENST00000489078 1255 ntBASIC19.87■□□□□ 0.77
COCHO43405 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.87■□□□□ 0.77
COCHO43405 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
COCHO43405 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.87■□□□□ 0.77
COCHO43405 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.87■□□□□ 0.77
COCHO43405 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COCHO43405 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COCHO43405 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.86■□□□□ 0.77
COCHO43405 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
COCHO43405 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COCHO43405 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.86■□□□□ 0.77
COCHO43405 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COCHO43405 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COCHO43405 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.86■□□□□ 0.77
COCHO43405 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COCHO43405 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms