Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.54■□□□□ 0.72
RIPK2O43353 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RIPK2O43353 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.54■□□□□ 0.72
RIPK2O43353 OR10C1-204ENST00000622521 1039 ntBASIC19.54■□□□□ 0.72
RIPK2O43353 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.54■□□□□ 0.72
RIPK2O43353 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
RIPK2O43353 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RIPK2O43353 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RIPK2O43353 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RIPK2O43353 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.53■□□□□ 0.72
RIPK2O43353 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.53■□□□□ 0.72
RIPK2O43353 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RIPK2O43353 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 AC034268.1-201ENST00000441047 882 ntBASIC19.53■□□□□ 0.72
RIPK2O43353 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.53■□□□□ 0.72
RIPK2O43353 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RIPK2O43353 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.53■□□□□ 0.72
RIPK2O43353 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RIPK2O43353 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
RIPK2O43353 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.52■□□□□ 0.72
RIPK2O43353 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 FEM1AP3-201ENST00000403722 1741 ntBASIC19.52■□□□□ 0.72
RIPK2O43353 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.52■□□□□ 0.72
RIPK2O43353 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.52■□□□□ 0.72
RIPK2O43353 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RIPK2O43353 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RIPK2O43353 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RIPK2O43353 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.51■□□□□ 0.71
RIPK2O43353 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RIPK2O43353 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
RIPK2O43353 AC093787.1-201ENST00000450396 207 ntBASIC19.51■□□□□ 0.71
RIPK2O43353 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.51■□□□□ 0.71
RIPK2O43353 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.51■□□□□ 0.71
RIPK2O43353 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.51■□□□□ 0.71
RIPK2O43353 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.51■□□□□ 0.71
RIPK2O43353 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.51■□□□□ 0.71
RIPK2O43353 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RIPK2O43353 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RIPK2O43353 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.51■□□□□ 0.71
RIPK2O43353 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.51■□□□□ 0.71
RIPK2O43353 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK2O43353 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.5■□□□□ 0.71
RIPK2O43353 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK2O43353 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RIPK2O43353 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RIPK2O43353 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms