Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC1O15269 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC1O15269 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC1O15269 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC1O15269 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.61■□□□□ 0.89
SPTLC1O15269 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.61■□□□□ 0.89
SPTLC1O15269 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.61■□□□□ 0.89
SPTLC1O15269 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPTLC1O15269 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC1O15269 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC1O15269 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC1O15269 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.6■□□□□ 0.89
SPTLC1O15269 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.6■□□□□ 0.89
SPTLC1O15269 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.6■□□□□ 0.89
SPTLC1O15269 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPTLC1O15269 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SPTLC1O15269 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPTLC1O15269 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SPTLC1O15269 KRT8P11-201ENST00000409686 1436 ntBASIC20.59■□□□□ 0.89
SPTLC1O15269 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.59■□□□□ 0.89
SPTLC1O15269 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC1O15269 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC1O15269 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC1O15269 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC1O15269 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SPTLC1O15269 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC1O15269 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC1O15269 TSPY14P-201ENST00000303979 915 ntBASIC20.58■□□□□ 0.89
SPTLC1O15269 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPTLC1O15269 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.58■□□□□ 0.89
SPTLC1O15269 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
SPTLC1O15269 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC1O15269 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC1O15269 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC1O15269 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC1O15269 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.58■□□□□ 0.89
SPTLC1O15269 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
SPTLC1O15269 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC1O15269 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC1O15269 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SPTLC1O15269 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.58■□□□□ 0.88
SPTLC1O15269 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
SPTLC1O15269 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SPTLC1O15269 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SPTLC1O15269 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SPTLC1O15269 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SPTLC1O15269 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.57■□□□□ 0.88
SPTLC1O15269 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.57■□□□□ 0.88
SPTLC1O15269 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.57■□□□□ 0.88
SPTLC1O15269 CKBP1-201ENST00000565489 1086 ntBASIC20.57■□□□□ 0.88
SPTLC1O15269 AC005363.2-201ENST00000618631 242 ntBASIC20.57■□□□□ 0.88
SPTLC1O15269 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPTLC1O15269 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SPTLC1O15269 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 Z82202.1-201ENST00000623446 1880 ntBASIC20.56■□□□□ 0.88
SPTLC1O15269 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms