Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC28A1O00337 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.52■□□□□ 0.56
SLC28A1O00337 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.52■□□□□ 0.56
SLC28A1O00337 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SLC28A1O00337 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SLC28A1O00337 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC28A1O00337 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SLC28A1O00337 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.52■□□□□ 0.55
SLC28A1O00337 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A1O00337 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
SLC28A1O00337 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A1O00337 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A1O00337 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A1O00337 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SLC28A1O00337 HCG11-201ENST00000411553 5696 ntBASIC18.52■□□□□ 0.55
SLC28A1O00337 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC28A1O00337 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC28A1O00337 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 AC069152.1-201ENST00000438030 544 ntBASIC18.51■□□□□ 0.55
SLC28A1O00337 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SLC28A1O00337 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC28A1O00337 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.51■□□□□ 0.55
SLC28A1O00337 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC28A1O00337 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC28A1O00337 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.51■□□□□ 0.55
SLC28A1O00337 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 IRX1P1-201ENST00000438849 1838 ntBASIC18.51■□□□□ 0.55
SLC28A1O00337 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.51■□□□□ 0.55
SLC28A1O00337 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC28A1O00337 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC28A1O00337 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLC28A1O00337 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC28A1O00337 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC28A1O00337 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC28A1O00337 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC28A1O00337 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC28A1O00337 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC28A1O00337 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC28A1O00337 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SLC28A1O00337 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC28A1O00337 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC28A1O00337 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC28A1O00337 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SLC28A1O00337 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SLC28A1O00337 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 UNC93B4-201ENST00000505679 747 ntBASIC18.49■□□□□ 0.55
SLC28A1O00337 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC28A1O00337 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC28A1O00337 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC28A1O00337 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
SLC28A1O00337 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC28A1O00337 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms