Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC026271.3-201ENST00000571884 352 ntBASIC17.04■□□□□ 0.32
NPIPB4C9JG80 MIR4651-201ENST00000582622 73 ntBASIC17.04■□□□□ 0.32
NPIPB4C9JG80 AC131212.4-201ENST00000623606 975 ntBASIC17.04■□□□□ 0.32
NPIPB4C9JG80 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPIPB4C9JG80 CROCCP3-202ENST00000420820 1947 ntBASIC17.04■□□□□ 0.32
NPIPB4C9JG80 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 RARRES2P10-201ENST00000564312 460 ntBASIC17.03■□□□□ 0.32
NPIPB4C9JG80 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.03■□□□□ 0.32
NPIPB4C9JG80 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 AL138781.2-201ENST00000617896 1843 ntBASIC17.03■□□□□ 0.32
NPIPB4C9JG80 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.03■□□□□ 0.32
NPIPB4C9JG80 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 AC004980.1-204ENST00000429707 299 ntBASIC17.02■□□□□ 0.32
NPIPB4C9JG80 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.02■□□□□ 0.32
NPIPB4C9JG80 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 AP002982.1-201ENST00000492365 877 ntBASIC17.02■□□□□ 0.32
NPIPB4C9JG80 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
NPIPB4C9JG80 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPIPB4C9JG80 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 HTR7P1-201ENST00000538670 1336 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 AC093503.3-201ENST00000624917 2352 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 PRSS44-201ENST00000515154 1146 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 RPPH1-201ENST00000516869 333 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 C1QBPP2-201ENST00000528754 825 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPIPB4C9JG80 ITM2C-210ENST00000620962 501 ntBASIC17.01■□□□□ 0.31
NPIPB4C9JG80 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms