Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01548A6NM66 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01548A6NM66 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 AC116562.4-201ENST00000641316 2276 ntBASIC15.18■□□□□ 0.02
LINC01548A6NM66 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 UNC93B2-201ENST00000285383 730 ntBASIC15.18■□□□□ 0.02
LINC01548A6NM66 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 BX088651.1-201ENST00000540551 451 ntBASIC15.18■□□□□ 0.02
LINC01548A6NM66 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01548A6NM66 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
LINC01548A6NM66 KRT8P9-201ENST00000558927 1449 ntBASIC15.17■□□□□ 0.02
LINC01548A6NM66 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 MIR1238-201ENST00000408483 83 ntBASIC15.17■□□□□ 0.02
LINC01548A6NM66 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01548A6NM66 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01548A6NM66 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 AC097488.1-201ENST00000507834 756 ntBASIC15.16■□□□□ 0.02
LINC01548A6NM66 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 SLC25A1P4-201ENST00000567977 778 ntBASIC15.16■□□□□ 0.02
LINC01548A6NM66 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms