Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHB11Q9Y5F2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 KSR1P1-201ENST00000446298 240 ntBASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHB11Q9Y5F2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 KRT8P8-201ENST00000434750 1448 ntBASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 LINC01568-207ENST00000641790 1380 ntBASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 MIR1238-201ENST00000408483 83 ntBASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 NAPSB-206ENST00000562112 1266 ntBASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDHB11Q9Y5F2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 AP000525.1-201ENST00000608286 694 ntBASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 REXO1L10P-201ENST00000615707 1290 ntBASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDHB11Q9Y5F2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 TREX1-205ENST00000625293 1783 ntBASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 KRT18P22-201ENST00000402024 1347 ntBASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 NIFKP9-201ENST00000419265 221 ntBASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDHB11Q9Y5F2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDHB11Q9Y5F2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms