Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 SLC25A24-204ENST00000569674 2357 ntBASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 KRT8P9-201ENST00000558927 1449 ntBASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB9Q9Y5E1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 KSR1P1-201ENST00000446298 240 ntBASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 AC087388.1-201ENST00000571370 1112 ntBASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 HLA-A-209ENST00000638375 975 ntBASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB9Q9Y5E1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB9Q9Y5E1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 LINC01465-201ENST00000408887 1940 ntBASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 CR392000.1-201ENST00000624770 1228 ntBASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB9Q9Y5E1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 TERF1P1-201ENST00000311003 1181 ntBASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 LIN28AP1-201ENST00000429574 405 ntBASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 NTF6B-201ENST00000591913 560 ntBASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 AL445675.2-201ENST00000620291 557 ntBASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB9Q9Y5E1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB9Q9Y5E1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms