Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 AF213884.3-201ENST00000563833 479 ntBASIC18.21■□□□□ 0.51
AP4S1Q9Y587 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
AP4S1Q9Y587 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.21■□□□□ 0.5
AP4S1Q9Y587 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 AC106739.1-201ENST00000617035 715 ntBASIC18.2■□□□□ 0.5
AP4S1Q9Y587 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
AP4S1Q9Y587 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 AC067852.2-201ENST00000590513 2313 ntBASIC18.19■□□□□ 0.5
AP4S1Q9Y587 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
AP4S1Q9Y587 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms