Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 AC073592.3-201ENST00000625118 1834 ntBASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRCH1Q9Y2L9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 AC126763.1-201ENST00000552015 2118 ntBASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 AC061975.6-201ENST00000579045 1553 ntBASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCH1Q9Y2L9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 MIR572-201ENST00000384983 95 ntBASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.27■□□□□ 0.52
LRCH1Q9Y2L9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.27■□□□□ 0.51
LRCH1Q9Y2L9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 AL358852.1-201ENST00000623174 1268 ntBASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRCH1Q9Y2L9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRCH1Q9Y2L9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms